The University of Arizona

Hanna (Johnny) Fares

Associate Professor of Molecular & Cellular Biology
Ph.D., University of North Carolina

Analysis of membrane trafficking; Caenorhabditis elegans as a model system.

Research Interests

The trafficking of vesicles/membrane between different compartments of a cell is an essential process in all eukaryotic cells and is used to maintain cellular integrity, to interact with the extracellular environment, and to generally modulate various cellular activities. Numerous advances have been made in understanding different pathways of vesicle trafficking and in elucidating some of the factors that regulate them; these advances have demonstrated a striking conservation of these pathways among all eukaryotic cells.

We have taken a genetic approach to study vesicle trafficking in the nematode C. elegans whose small size, ease of handling, and sequenced genome makes it perfectly suited for that purpose. We have concentrated on two separate pathways: 1) endocytosis of extracellular material by scavenger cells, and 2) polarized secretion by an epithelial cell sheet.

There are six cells called coelomocytes in the body cavity of C. elegans that constitutively endocytose fluid. We have established as assay whereupon GFP secreted into the body cavity is taken up by these cells and have identified several genes involved in this process. Future plans include studying the function of these genes in this process and identifying other genes using forward and reverse genetic approaches. The comparative analysis of endocytosis in C. elegans and in other systems should give us a better understanding of this central biological process.

The C. elegans hypodermis is a polarized epithelial layer with well defined apical and basolateral domains. We have shown that GFP secreted from these cells is targeted to the apical domain. We have used this assay to screen for mutants defective in this process and have identified some genes involved in this process. Future plans include the analysis of these genes and the identification of others that function in regulating the targeted delivery of vesicles. The aim is to better understand how epithelial cells establish and maintain their polarity.

Select Publications

Any link on the below references will take you off of the BMCB site and to an abstract of that particular paper.

Schaheen, L., G. Patton, and H. Fares. 2006. Suppression of the cup-5 Mucolipidosis Type IV-related lysosomal dysfunction by the inactivation of an ABC Transporter in C. elegans. Development (in press).

Nicot, A.-S., H. Fares, B. Payrastre, A. Chisholm, M. Labouesse, and H. Laporte. 2006. The phosphoinositide kinase PIKfyve/Fab1p regulates terminal lysosome maturation in Caenorhabditis elegans. Molecular Biology of the Cell 7: 3062-3074.

Schaheen, L., H. Dang, and H. Fares. 2006. Basis of lethality in C. elegans lacking CUP-5, the Mucolipidosis Type IV orthologue. Developmental Biology 293: 382-391.

Patton, A., S. Knuth, B. Schaheen, H. Dang, I. Greenwald, and H. Fares. 2005. Endocytosis function of a ligand-gated ion channel homolog in Caenorhabditis elegans. Current Biology 15: 1045-1050.

Treusch, S., W. Knuth, S.A. Slaugenhaupt, E. Goldin, B.D. Grant, and H. Fares. 2004. Caenorhabiditis elegans functional orthologue/human protein h-mucolipin-1 is required for lysosome biogenesis. Proceedings of the National Academy of Sciences U.S.A. 101: 4483-4488.

Dang, H., Z. Li, E.Y. Skolnik, and H. Fares. 2004. Disease-related myotubularins function in endocytic traffic. Molecular Biology of the Cell 15: 189-196.

Xue, Y., H. Fares, B. Grant, Z. Li, S.G. Clark, and E.Y. Skolnik. 2003. Genetic analysis of the myotubularin family of phosphatases in Caenorhabditis elegans. Journal of Biological Chemistry 278: 34380-34386.

Fares, H., and I. Greenwald. 2001. Regulation of endocytosis by CUP-5, the Caenorhabditis elegans mucolipin-1 homologue. Nature Genetics 28: 64-68.

Fares, H., and I. Greenwald. 2001. Genetic analysis of endocytosis in Caenorhabditis elegan: coelomocyte uptake defective mutants. Genetics 159: 133-145.

Fares, H., and B. Grant. 2002. Deciphering endocytosis in Caenorhabditis elegans. Traffic 3:11-19.

Contact Information

    Mailing:
    Hanna (Johnny) Fares, Associate Professor
    Department of Molecular & Cellular Biology
    University of Arizona
    Life Sciences South 531
    P.O. Box 210106
    Tucson, AZ 85721-0106

    Telephone:
    520-626-3759 (Office)
    520-626-5996 (Lab)

    Fax:
    520-
    621-3709

    Email:
    fares@email.arizona.edu

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May 2008
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